{"id":22,"date":"2016-04-25T10:29:52","date_gmt":"2016-04-25T10:29:52","guid":{"rendered":"http:\/\/arolab.umh.es\/?page_id=22"},"modified":"2026-04-13T20:10:24","modified_gmt":"2026-04-13T20:10:24","slug":"publications","status":"publish","type":"page","link":"https:\/\/arolab.umh.es\/en\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"

\"portadas\"<\/p>\n

Search for our publications on Pubmed<\/a> or click on the titles below:<\/p>\n

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  1. Arabidopsis RETINOBLASTOMA-RELATED controls cell size during plant development in a dose-dependent manner<\/a>
    \n<\/a>Hamid RSB, Vadai-Nagy F, Gombos M, Domonkos I, P\u00e9rez-P\u00e9rez JM<\/strong>, Feh\u00e9r A, Magyar Z
    \n<\/strong><\/strong>bioRxiv<\/em>, doi.org\/10.64898\/2026.03.30.715244 (2026)<\/li>\n
  2. Effects of novel biostimulants on the growth and transcriptomic response of maize seedlings under stress conditions
    \nJustamante MS<\/strong>, Larriba E<\/strong>, Zavala-Gonz\u00e1lez E, Aranda-Mart\u00ednez A, P\u00e9rez-P\u00e9rez JM<\/strong>\u00a0\u00a0
    \n<\/strong><\/strong>Submitted<\/i> (2026)<\/li>\n
  3. Transcriptome analysis in red palm weevil (Coleoptera: Curculionidae) larvae in response to low temperatures
    \n<\/a>Ant\u00f3n-Ruiz N, Larriba E<\/strong>, Le\u00f3n-Quinto T, Serna A, P\u00e9rez-P\u00e9rez JM<\/strong>\u00a0\u00a0
    \n<\/strong><\/strong>Submitted<\/i> (2026)<\/li>\n
  4. Role of the tomato MARS1\/ROUGH<\/em> gene encoding a LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 in adventitious root and fruit skin formation<\/a>
    \n<\/a>Larriba E<\/strong>, Br\u00e8s C, Alaguero-Cordovilla A<\/strong>, Riyazuddin R<\/strong>, Wang Q, Petit J, Mauxion JP, Caballero L<\/strong>, Latrasse D, Bakan B, Brik-Chaouke R, Esteve-Bruna D<\/strong>, Benhamed M, Rothan C, P\u00e9rez-P\u00e9rez JM<\/strong>\u00a0
    \n<\/strong><\/strong>bioRxiv<\/em>, doi.org\/10.1101\/2025.07.29.665673\u00a0(2025)<\/li>\n
  5. Molecular biology needs a map: spatial in situ<\/em> approaches in plant science<\/a>
    \n<\/a>Pasternak T<\/strong>, Yaroshko O\u00a0
    \n<\/strong><\/strong>Plant Biol.<\/em> 28: 323 (2026)<\/li>\n
  6. Exploring the influence of insect honeydew on plant physiology and health: bridging the gap in current understanding<\/a>
    \n<\/a>Ali J, Chen R, Danish M, Riyazuddin R<\/strong>, Dardouri T, Yusuf AA, Conti E, Bayram A\u00a0
    \n<\/strong><\/strong>Physiol. Plant.<\/em> 177: e70623 (2025)<\/li>\n
  7. Fass and C3\/C4 contribute to the activities and levels of the protein phosphatase 2A catalytic subunit pool and regulate mitotic events in Arabidopsis<\/a>
    \n<\/a>Kelemen A, K\u00f3nya Z, Ujlaky-Nagy L, Garda T, Erd\u0151di F, Freytag C, Juh\u00e1sz GP, Pasternak T<\/strong>, Riba M, M\u00e1th\u00e9 C\u00a0
    \n<\/strong><\/strong>Plant Physiol. Biochem.<\/em> 227: 110187 (2025)<\/li>\n
  8. Optimizing in vitro propagation of Haworthia truncata<\/em> Sch\u00f6nland using leaf, root, and inflorescence<\/a>
    \n<\/a>Soleimani L, Salehi H, Pasternak T<\/strong>\u00a0
    \n<\/strong><\/strong>Plants<\/em> 14: 212 (2025)<\/li>\n
  9. Low ethylene production in the rootstock alleviates salt stress in tomato<\/a>
    \n<\/a>Mart\u00edn-Rodr\u00edguez J, Mart\u00ednez-Melgarejo PA, Guillam\u00f3n J, Prudencio AS, Guerrero JJ, Larriba E<\/strong>, P\u00e9rez-P\u00e9rez JM<\/strong>, Olmos E, Perez L, Mart\u00ednez-And\u00fajar C, P\u00e9rez-Alfocea F\u00a0
    \n<\/strong><\/strong>Authorea<\/em>, doi: 10.22541\/au.176155600.06834638\/v1 (2025)<\/li>\n
  10. The manifestation of the dual ROS-processing and redox signaling roles of glutathione peroxidase-like enzymes in development of Arabidopsis seedlings<\/a>
    \n<\/a>Bela K, Tompa B, Riyazuddin R<\/strong>, Horv\u00e1th E, J\u00e1sz K, Hajnal A, Han Bangash SA, Gall\u00e9 A, Csis\u00e1r J\u00a0
    \n<\/strong><\/strong>Antioxidants <\/em>14: 518 (2025)<\/li>\n
  11. Deciphering the plants\u2019 response to flood-induced hypoxia and anoxia at the molecular level<\/a>
    \n<\/a>Singh K, Abbas SH, Singh S, Iqbal N, Kocsy G, P\u00e9rez-P\u00e9rez JM, Riyazuddin R<\/strong>\u00a0
    \n<\/strong><\/strong>In: Plant Flooding. Plant in Challenging Environments, vol 6. Springer (2025)<\/li>\n
  12. A systematic review to identify target genes that modulate root system architecture in response to abiotic stress<\/a>
    \n<\/a>Justamante MS, Larriba E, Luque A, Nicol\u00e1s-Albujer M, P\u00e9rez-P\u00e9rez JM<\/strong>\u00a0
    \n<\/strong>Sci. Rep<\/em>. 15: 2319 (2025)<\/li>\n
  13. Transcriptional profiling to assess the effects of biological stimulant Atlanticell Micomix on tomato seedlings under salt stress<\/a>
    \n<\/a>Justamante MS, Larriba E, <\/strong>Zavala-Gonz\u00e1lez E, Aranda-Mart\u00ednez A, P\u00e9rez-P\u00e9rez JM<\/strong>\u00a0
    \n<\/strong><\/strong>Plants<\/em> 14: 1198 (2025)<\/li>\n
  14. Identification of novel inhibitors of plant GH3 IAA-amido synthetases through molecular docking studies<\/a>
    \n<\/a>Luque A#<\/sup><\/strong>, Blanes-Mira C#<\/sup><\/strong>, Caballero L<\/strong>, Mart\u00ednez-Melgarejo PA, Nicol\u00e1s-Albujer M<\/strong>, P\u00e9rez-Alfocea F, Fern\u00e1ndez-Ballester G,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong>\u00a0
    \n<\/strong><\/strong>Physiol. Plant.<\/em> 176: e14612 (2024) [\u00a0    Open Access file<\/a>\u00a0]<\/li>\n
  15. Connecting high-resolution 3D chromatin maps with cell division and cell differentiation at the root apical meristem<\/a>
    \n<\/a>Caballero L<\/strong>, Pasternak T<\/strong>, Riyazuddin R<\/strong>, P\u00e9rez-P\u00e9rez JM<\/strong>\u00a0
    \n<\/strong><\/strong>Plant Cell Rep<\/em>. 43: 232 (2024)<\/li>\n
  16. An atlas of the tomato epigenome reveals that KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac distribution<\/a>
    \n<\/a>An J, Brik Chaouche R, Pereyra-Bistra\u00edn LI, Zalzal\u00e9 H, Wang Q, Huang Y, He X, Dias Lopes C, Antunez-Sanchez J, Bergounioux C, Boulogne C, Dupas C, Gillet C, P\u00e9rez-P\u00e9rez JM<\/strong>, Mathieu O, Bouch\u00e9 N, Fragkostefanakis S, Zhang Y, Zheng S, Crespi M, Mahfouz MM, Ariel F, Gutierrez-Marcos J, Raynaud C, Latrasse D, Benhamed M
    \n<\/strong><\/strong>Proc. Natl. Acad. Sci. USA <\/em>121: e2400737121 (2024)<\/li>\n
  17. Identification of new targets for glioblastoma therapy based on a DNA expression microarray<\/a>
    \n<\/a>Larriba E<\/strong>, de Juan Romero C, Garc\u00eda-Mart\u00ednez A, Quintanar T, Rodr\u00edguez-Lescure A, Soto JL, Saceda M, Mart\u00edn-Nieto J, Barber\u00e1 VM
    \n<\/strong><\/strong>Comput. Biol. Med. <\/em>179: 108833 (2024)<\/li>\n
  18. Ascorbate, plant hormones and their interactions during plant responses to biotic stress<\/a>
    \n<\/a>Singh K, Gupta R, Iqbal N, Kocsy G,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong>,\u00a0Riyazuddin R
    \n<\/strong><\/strong>Physiol. Plant.\u00a0<\/em>176: e14388 (2024)<\/li>\n
  19. Genes involved in auxin biosynthesis, transport and signalling underlie the extreme adventitious root phenotype of the tomato aer<\/em> mutant<\/a>
    \n<\/a>Kevei Z, Larriba E<\/strong>, Romero-Bosquet MD, Nicol\u00e1s-Albujer M<\/strong>, Kurowski T, Mohareb F, Rickett D, P\u00e9rez-P\u00e9rez JM<\/strong>, Thompson AJ
    \n<\/strong><\/strong>Theor. Appl. Genet.<\/em>\u00a0137: 76 (2024)<\/li>\n
  20. Recent advances in tomato gene editing<\/a>
    \n<\/a>Larriba E<\/strong>, Yaroshko O<\/strong>, P\u00e9rez-P\u00e9rez JM<\/strong>
    \n<\/strong><\/strong>Int. J. Mol. Sci. <\/em>25: 2606\u00a0(2024)<\/li>\n
  21. Temporal profiling of physiological, histological, and transcriptomic dissection during auxin-induced adventitious root formation in tetraploid Robinia pseudoacacia<\/em> micro-cuttings<\/a>
    \n<\/a>Udin S, Munir MZ, Larriba E<\/strong>, P\u00e9rez-P\u00e9rez JM<\/strong>, Gull S, Pervaiz T, Mahmood U, Mahmood Z, Sun Y, Li Y
    \n<\/strong><\/strong>Planta <\/em>259:66\u00a0(2024)<\/li>\n
  22. Plant growth regulation in cell and tissue culture in vitro<\/a>
    \n<\/a>Pasternak T<\/strong><\/strong>, Steinmacher D
    \n<\/strong><\/strong>Plants<\/em>\u00a013: 227 (2024)<\/li>\n
  23. A new in vitro growth system for phenotypic characterization and seed propagation of Arabidopsis thaliana<\/em><\/a>
    \n<\/a>Pasternak T<\/strong><\/strong>, P\u00e9rez-P\u00e9rez JM<\/strong><\/strong>, Ruperti B, Aleksandrova T, Palme K
    \n<\/strong><\/strong>J. Plant Growth Regul. <\/em>43: 652 (2024)<\/li>\n
  24. Regulation of early seedling establishment and root development in Arabidopsis thaliana<\/em> by light and carbohydrates<\/a>
    \n<\/a>Pasternak T<\/strong><\/strong>, Kircher S, Palme K, P\u00e9rez-P\u00e9rez JM<\/strong><\/strong>
    \n<\/strong><\/strong>Planta<\/em>\u00a0258: 76 (2023)<\/li>\n
  25. Optimization of callus induction and shoot regeneration from tomato cotyledon explants<\/a>
    \n<\/a>Yaroshko O<\/strong><\/strong>, Pasternak T<\/strong><\/strong>, Larriba E<\/strong><\/strong>,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong><\/strong>
    \n<\/strong><\/strong>Plants<\/em>\u00a012: 2942 (2023)<\/li>\n
  26. Role of reactive oxygen species in the modulation of auxin flux and root development in Arabidopsis thaliana<\/em><\/a>
    \n<\/a>Pasternak T<\/strong><\/strong>, Palme K, P\u00e9rez-P\u00e9rez JM<\/strong><\/strong>
    \n<\/strong><\/strong>Plant J.<\/em>\u00a0114: 83 (2023)<\/li>\n
  27. Mapping of the classical mutation rosette<\/em> highlights a role for calcium in wound-induced rooting<\/a>
    \n<\/a>Modrego A, Pasternak T<\/strong><\/strong>, Omary M, Albacete A, Cano A, , P\u00e9rez-P\u00e9rez JM<\/strong><\/strong>, Efroni I
    \n<\/strong><\/strong>Plant Cell Physiol.<\/em>\u00a064: 152 (2023) [     bioRxiv<\/a>\u00a0]<\/li>\n
  28. Transcriptomic and hormonal analysis of the roots of maize seedlings grown hydroponically at low temperature<\/a>
    \n<\/a>Friero I, Larriba E<\/strong><\/strong>, Mart\u00ednez-Melgarejo PA, Justamante MS<\/strong><\/strong>, Alarc\u00f3n MV, Albacete A, Salguero J, P\u00e9rez-P\u00e9rez JM
    \n<\/strong><\/strong>Plant Sci.<\/em> 326: 111525 (2023) [     SSRN<\/a> ]<\/li>\n
  29. Identification of transcriptional networks involved in de novo organ formation in tomato hypocotyl explants<\/a>
    \n<\/a>Larriba E<\/strong>, Nicol\u00e1s-Albujer M<\/strong><\/strong>, S\u00e1nchez-Garc\u00eda AB<\/strong>, P\u00e9rez-P\u00e9rez JM<\/strong><\/strong>
    \n<\/strong><\/strong>Int. J. Mol. Sci. <\/em>23: 16112 (2022)<\/li>\n
  30. Root meristems: Don’t TOR at the TOP<\/a>
    \nP\u00e9rez-P\u00e9rez JM
    \n<\/strong><\/strong>Nature Plants<\/em>\u00a08: 729 (2022)<\/li>\n
  31. Effects of auxin (indole-3-butyric acid) on adventitious root formation in peach-based Prunus Rootstocks<\/a>
    \nJustamante MS<\/strong>, Mhimdi M<\/strong>, Molina-P\u00e9rez M<\/strong>, Albacete A, Moreno MA, Mataix I, P\u00e9rez-P\u00e9rez JM
    \n<\/strong><\/strong>Plants<\/em>\u00a011: 913\u00a0(2022)<\/li>\n
  32. A simple pipeline for cell cycle kinetic studies in the root apical meristem<\/a>
    \nPasternak\u00a0T<\/strong>,\u00a0Kircher\u00a0S, P\u00e9rez-P\u00e9rez JM<\/strong><\/strong>, Palme K\u00a0 \u00a0<\/strong>
    \n<\/strong>J. Exp. Bot.<\/em> 73: 4683 (2022)<\/li>\n
  33. Mitigation of calcium-related disorders in soilless production systems<\/a>
    \nBirlanga V<\/strong>, Acosta-Motos JR, P\u00e9rez-P\u00e9rez JM\u00a0\u00a0<\/strong>
    \n<\/strong>Agronomy<\/em>\u00a012: 644 (2022)<\/li>\n
  34. Plant development: from cells to systems biology<\/a>
    \nde Folter S, Palme K, P\u00e9rez-P\u00e9rez JM\u00a0\u00a0<\/strong>
    \n<\/strong>Front. Plant Sci.<\/em> 12: 810071 (2021)<\/li>\n
  35. Methods of in situ<\/em> quantitative root biology<\/a>
    \nPasternak T, P\u00e9rez-P\u00e9rez JM\u00a0\u00a0<\/strong>
    \n<\/strong>Plants<\/em>\u00a010: 2399 (2021) [     bioRxiv<\/a> ]<\/li>\n
  36. Dynamic hormone gradients regulate wound-induced de novo organ formation in tomato hypocotyl explants<\/a>
    \nLarriba E#<\/sup><\/strong>, S\u00e1nchez-Garc\u00eda AB#<\/sup><\/strong>, Justamante MS, Mart\u00ednez-And\u00fajar C, Albacete A, P\u00e9rez-P\u00e9rez JM\u00a0\u00a0<\/strong>
    \n<\/strong>Int. J. Mol. Sci.\u00a0<\/em>22: 11843 (2021)<\/li>\n
  37. Genome-wide high-resolution mapping of DNA methylation reveals epigenetic variation in the offspring of sexual and asexual propagation in Robinia pseudoacacia<\/em><\/a>
    \nZhang Z, Liu J, Sun Y, Wang S, Xing X, Feng X, P\u00e9rez-P\u00e9rez JM<\/strong>, Li Y\u00a0\u00a0<\/strong>
    \n<\/strong>Plant Cell Rep.<\/em>\u00a040: 2435 (2021)<\/li>\n
  38. Optimization of ROS measurement and localization in plant tissues: challenges and solutions<\/a>
    \nPasternak T, P\u00e9rez-P\u00e9rez JM\u00a0\u00a0<\/strong>
    \n<\/strong>protocols.io<\/em>\u00a0doi: 10.17504\/protocols.io.bx49pqz6\u00a0(2021)<\/li>\n
  39. Tissue-specific metabolic reprogramming during wound induced de novo<\/em> organ formation in tomato hypocotyl explants<\/a>
    \nLarriba E<\/strong>, S\u00e1nchez-Garc\u00eda AB<\/strong>, Mart\u00ednez-And\u00fajar C, Albacete A, P\u00e9rez-P\u00e9rez JM\u00a0\u00a0<\/strong>
    \n<\/strong>Int. J. Mol. Sci.\u00a0<\/em>22: 10112\u00a0(2021)\u00a0[\u00a0    bioRxiv<\/a> ]<\/li>\n
  40. Overproduction of ABA in rootstocks alleviates salinity stress in tomato roots<\/a>
    \nMart\u00ednez-And\u00fajar C, Mart\u00ednez-P\u00e9rez A, Albacete A, Mart\u00ednez-Melgarejo PA, Dodd I, Thompson AJ, Ferr\u00e1ndez-Ayela A<\/strong>, P\u00e9rez-P\u00e9rez JM<\/strong>, Gifford M, P\u00e9rez-Alfocea F\u00a0\u00a0<\/strong><\/strong>
    \n<\/strong><\/strong>Plant Cell Environ.<\/em>\u00a044: 2966 (2021)\u00a0[\u00a0    Open Access file<\/a>\u00a0]<\/li>\n
  41. An auxin\u2010mediated regulatory framework for wound\u2010induced adventitious root formation in tomato shoot explants<\/a>
    \nAlaguero-Cordovilla A, S\u00e1nchez-Garc\u00eda AB, Ib\u00e1\u00f1ez S, <\/strong><\/strong>Albacete A, Cano A, Acosta M, P\u00e9rez-P\u00e9rez JM\u00a0\u00a0<\/strong><\/strong>
    \n<\/strong><\/strong>Plant Cell Environ.<\/em>\u00a044: 1642 (2021)\u00a0[     Open Access file<\/a> ]<\/li>\n
  42. Genotype-dependent tipburn severity during lettuce hydroponic culture is associated with altered nutrient leaf content<\/a>
    \nBirlanga V<\/strong><\/strong>, Acosta-Motos JR, P\u00e9rez-P\u00e9rez JM\u00a0\u00a0<\/strong>
    \n<\/strong>Agronomy<\/em>\u00a011: 616 (2021)<\/li>\n
  43. Understanding of adventitious root formation: what can we learn from comparative genetics?<\/a>
    \nMhimdi M<\/strong><\/strong>, P\u00e9rez-P\u00e9rez JM\u00a0\u00a0<\/strong><\/strong>
    \n<\/strong><\/strong>Front. Plant Sci.<\/em>\u00a011: 582020 (2020)<\/li>\n
  44. A quick protocol for the identification and characterization of early growth mutants in tomato<\/a>
    \nAlaguero-Cordovilla\u00a0A,\u00a0Gran-G\u00f3mez FJ<\/strong>, Jadczak P, Mhimdi M, Ib\u00e1\u00f1ez S,\u00a0<\/strong>Bres C, Just D, Rothan C,\u00a0P\u00e9rez-P\u00e9rez\u00a0<\/strong>JM<\/strong>
    \n<\/strong><\/strong>Plant Sci.<\/em>\u00a0301: 110673 (2020)\u00a0[     Open Access file<\/a>\u00a0]<\/li>\n
  45. Anchor root development: a world within worlds<\/a>
    \n<\/strong>P\u00e9rez-P\u00e9rez\u00a0<\/strong>JM<\/strong>
    \n<\/strong><\/strong>Mol. Plant<\/em>\u00a08: 1105 (2020)<\/li>\n
  46. Advances in plant regeneration: shake, rattle and roll<\/a>
    \n<\/strong>Ib\u00e1\u00f1ez S<\/strong>, Carneros E, Testillano PS, P\u00e9rez-P\u00e9rez\u00a0<\/strong>JM<\/strong>
    \n<\/strong>Plants<\/em>\u00a09: 897 (2020)<\/li>\n
  47. Impact of overexpression of 9-cis-epoxycarotenoid dioxygenase on growth and gene expression under salinity stress<\/a>
    \n<\/a><\/strong>Mart\u00ednez-And\u00fajar C, Mart\u00ednez-P\u00e9rez A, Ferr\u00e1ndez-Ayela A, <\/strong>Albacete A,\u00a0Mart\u00ednez-Melgarejo PA,\u00a0Dodd IC, Thompson AJ, P\u00e9rez-P\u00e9rez\u00a0<\/strong>JM<\/strong>, P\u00e9rez-Alfocea F
    \n<\/strong>Plant Sci.<\/em>\u00a0295: 110268 (2020)<\/li>\n
  48. Integrated analysis of the physiology, RNA, and microRNA involved in black locust (Robinia pseudoacacia<\/em>) rejuvenation<\/a>
    \n<\/a><\/strong>Zhang Z, Sun Y, Han C, Dong L, Guo Q, Li X, Cao S, Ud Din S, Munir Z, P\u00e9rez-P\u00e9rez JM<\/strong>, Li Y
    \n<\/strong>Research Square<\/em>\u00a0doi: 10.21203\/rs.2.10375\/v1 (2019)<\/li>\n
  49. Integration of phenotype and hormone data during adventitious rooting in carnation (Dianthus caryophyllus<\/em> L.) stem cuttings<\/a>
    \n<\/a>Justamante MS<\/strong>, Acosta-Motos JR, Cano A, Villanova J, Birlanga V<\/strong>, Albacete A, Cano EA, Acosta M, P\u00e9rez-P\u00e9rez\u00a0<\/strong>JM
    \n<\/strong>Plants<\/em>\u00a08: 226 (2019)<\/li>\n
  50. A network-guided genetic approach to identify novel regulators of adventitious root formation in Arabidopsis thaliana<\/em><\/a>
    \n<\/a>Ib\u00e1\u00f1ez S<\/strong>, Ruiz-Cano H<\/strong>, Fern\u00e1ndez MA<\/strong>, S\u00e1nchez-Garc\u00eda AB<\/strong>, Villanova J<\/strong>, Micol, JL, P\u00e9rez-P\u00e9rez JM
    \n<\/strong>Front. Plant Sci.\u00a0<\/em>10: 461 (2019)<\/li>\n
  51. A genome-wide association study identifies new loci required for wound-induced lateral root formation in Arabidopsis thaliana
    \n<\/em><\/a>Justamante\u00a0MS<\/strong>, Ib\u00e1\u00f1ez S<\/strong>, Peidr\u00f3 A,\u00a0P\u00e9rez-P\u00e9rez JM
    \n<\/strong>Front. Plant Sci.\u00a0<\/em>10: 311\u00a0(2019)<\/li>\n
  52. Molecular and physiological control of adventitious rooting in cuttings: phytohormone action meets resource allocation<\/a>
    \n<\/a><\/strong>Druege U, Hilo A#<\/sup><\/strong>,\u00a0P\u00e9rez-P\u00e9rez JM#<\/sup><\/strong>, Klopotek Y, Acosta M, Shahinnia F, Zerche S, Franken P, Hajirezaei M
    \nAnn. Bot.\u00a0<\/em>123: 929 (2019)<\/li>\n
  53. Morphological characterization of root system architectural traits in diverse tomato genotypes during early growth<\/a>
    \n<\/a><\/strong>Alaguero-Cordovilla\u00a0A<\/strong>, Gran-G\u00f3mez FJ<\/strong>,\u00a0Tormos-Molt\u00f3 S,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong>
    \nInt. J. Mol. Sci.\u00a0<\/em>19: 3888\u00a0(2018)<\/li>\n
  54. INCURVATA11<\/em> and CUPULIFORMIS2<\/em>\u00a0are redundant genes that encode epigenetic machinery components in Arabidopsis<\/a>
    \n<\/a><\/strong>Mateo-Bonmat\u00ed E, Esteve-Bruna D, Juan-Vicente L, Nadi R, Candela H, Lozano FM, Ponce MR, P\u00e9rez-P\u00e9rez JM<\/strong>, Micol JL
    \nPlant Cell<\/em>\u00a0<\/i>30: 1596 (2018)<\/li>\n
  55. A comprehensive phylogeny of auxin homeostasis genes involved in adventitious root formation in carnation stem cuttings<\/a>
    \n<\/a>S\u00e1nchez-Garc\u00eda AB<\/strong>, Ib\u00e1\u00f1ez S<\/strong>, Cano A, Acosta M, P\u00e9rez-P\u00e9rez JM<\/strong>
    \nPLoS One\u00a0<\/em>13: e0196663\u00a0(2018)<\/li>\n
  56. Enhanced conjugation of auxin by GH3 enzymes leads to poor adventitious rooting in carnation stem cuttings<\/a>
    \n<\/a><\/strong>Cano A, S\u00e1nchez-Garc\u00eda AB<\/strong>, Albacete A, Gonz\u00e1lez-Bay\u00f3n R<\/strong>, Justamante MS<\/strong>,\u00a0Ib\u00e1\u00f1ez S<\/strong>, Acosta M, P\u00e9rez-P\u00e9rez JM<\/strong>
    \nFront. Plant Sci.<\/em>\u00a09: 566 (2018)<\/li>\n
  57. Regulation of hormonal control, cell reprograming and patterning during de novo<\/em> root organogenesis<\/a>
    \n<\/a><\/strong>Bustillo-Avenda\u00f1o E,\u00a0Ib\u00e1\u00f1ez S<\/strong>, Sanz O,\u00a0Barros JAS<\/strong>, Gude I, Perianez-Rodriguez J, Micol JL, Del Pozo JC, Moreno-Risue\u00f1o MA,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong>
    \nPlant Physiol.<\/em>\u00a0176: 1709 (2018)<\/li>\n
  58. Deficient glutamate biosynthesis triggers a concerted upregulation of ribosomal protein genes in Arabidopsis<\/a>
    \n<\/a><\/strong>Mu\u00f1oz-Nortes T, P\u00e9rez-P\u00e9rez JM<\/strong>, Sarmiento-Ma\u00f1\u00fas R, Candela H, Micol JL
    \nSci. Rep.<\/span>\u00a0<\/em>7: 6164\u00a0(2017)<\/li>\n
  59. Vegetative propagation of argan tree (Argania spinosa<\/em> (L.) Skeels) using in vitro<\/em> germinated seeds and stem cuttings<\/a>
    \n<\/a>Justamante MS<\/strong>, Ib\u00e1\u00f1ez S<\/strong>, Villanova J<\/strong>,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong>
    \nSci. Hort.<\/span>\u00a0<\/em>225: 81 (2017)     [Open Access file]<\/a><\/li>\n
  60. The ANGULATA7<\/em> gene encodes a DnaJ-like zinc finger-domain protein involved in chloroplast function and leaf development in Arabidopsis<\/a>
    \n<\/a><\/strong>Mu\u00f1oz-Nortes T, P\u00e9rez-P\u00e9rez JM<\/strong>, Ponce MR, Candela H, Micol JL
    \nPlant J.<\/span>\u00a0<\/em>89: 870\u00a0(2017)\u00a0    [Open Access file]<\/a> [Supplementary data]<\/a><\/li>\n
  61. Multiple factors influence adventitious rooting in carnation (Dianthus caryophyllus <\/em>L.) stem cuttings<\/a>
    \nVillanova J<\/strong>, Cano A, Albacete A, L\u00f3pez A, Cano EA, Acosta M,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong>
    \nPlant Growth Regul.<\/em>\u00a081: 511 (2017)\u00a0    [Open Access file]<\/a><\/li>\n
  62. Root-to-shoot hormonal communication in contrasting rootstocks suggests an important role for the ethylene precursor aminocyclopropane-1-carboxylic acid in mediating plant growth under low-potassium nutrition in tomato<\/a>
    \n<\/strong>Mart\u00ednez-And\u00fajar C, Albacete A, Mart\u00ednez-P\u00e9rez A, P\u00e9rez-P\u00e9rez JM<\/strong>, As\u00edns MJ, P\u00e9rez-Alfocea F
    \nFront. Plant Sci.<\/em>\u00a07: 1782 (2016)<\/li>\n
  63. Wound signaling of regenerative cell reprogramming<\/a>
    \nLup SD<\/strong>, Tian X, Xu J, P\u00e9rez-P\u00e9rez JM
    \n<\/strong>Plant Science\u00a0<\/em>\u00a0250: 178\u00a0(2016)\u00a0    [Open Access file]<\/a><\/li>\n
  64. Identification of novel stress-responsive biomarkers from gene expression datasets in tomato roots<\/a>
    \nFerr\u00e1ndez-Ayela A<\/strong>, S\u00e1nchez-Garc\u00eda AB<\/strong>, Mart\u00ednez-And\u00fajar C, Kevei Z, Gifford ML, Thompson AJ, P\u00e9rez-Alfocea F, P\u00e9rez-P\u00e9rez JM<\/strong>
    \nFunct. Plant Biol. <\/em>\u00a043: 783\u00a0(2016)\u00a0    [Open Access file]<\/a>\u00a0[Supplementary data]<\/a><\/li>\n
  65. TOPOISOMERASE1\u03b1<\/em> acts through two distinct mechanisms to regulate stele and columella stem cell maintenance in the Arabidopsis root<\/a>
    \nZhang Y, Zheng L, Hong JH, Gong X, Zhou C, Perez-Perez JM<\/strong>, Xu J
    \nPlant Physiol.<\/em>\u00a0171: 483\u00a0(2016)\u00a0    [Open Access file]<\/a><\/li>\n
  66. Gene expression profiling during adventitious root formation in carnation stem cuttings<\/a>
    \nVillacorta-Mart\u00edn C, S\u00e1nchez-Garc\u00eda AB<\/strong>,\u00a0Villanova J<\/strong>, Cano A, van de Rhee M, de Haan J, Acosta M, Passarinho P,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong>
    \nBMC Genomics<\/em>\u00a016: 789\u00a0(2015)<\/li>\n
  67. Quantitative analysis of adventitious root growth phenotypes in carnation stem cuttings<\/a>
    \nBirlanga V<\/strong>, Villanova J<\/strong>, Cano A, Cano EA, Acosta M, P\u00e9rez-P\u00e9rez JM<\/strong>
    \nPLoS One<\/em>\u00a010: e0133123\u00a0(2015)<\/li>\n
  68. Leaf phenomics: a systematic reverse genetic screen for Arabidopsis leaf mutants<\/a>
    \nWilson-S\u00e1nchez D, Rubio-D\u00edaz S, Mu\u00f1oz-Viana R, P\u00e9rez-P\u00e9rez JM<\/strong>, Jover-Gil S, Ponce MR, Micol JL
    \nPlant J.<\/em>\u00a079: 878 (2014)<\/li>\n
  69. Adventitious root development in ornamental plants: insights from carnation stem cuttings<\/a>
    \nCano E, P\u00e9rez-P\u00e9rez JM<\/strong>, Acosta M
    \nSoil Biology Series: Root engineering\u00a0<\/em>40: 423 (2014)\u00a0    [Open Access file]<\/a><\/li>\n
  70. Early steps of adventitious rooting: morphology, hormonal profiling and carbohydrate turnover in carnation stem cuttings<\/a>
    \nAgull\u00f3-Ant\u00f3n MA<\/strong>, Ferr\u00e1ndez-Ayela A<\/strong>, Fern\u00e1ndez-Garc\u00eda N, Nicol\u00e1s C, Albacete A, P\u00e9rez-Alfocea F, S\u00e1nchez-Bravo J, P\u00e9rez-P\u00e9rez JM#<\/sup><\/strong>, Acosta M#<\/sup>
    \nPhisiol. Plant.<\/em>\u00a0150: 446 (2014)\u00a0    [Open Access file]<\/a><\/li>\n
  71. A quantitative framework for flower phenotyping in cultivated carnation (Dianthus caryophyllus<\/em> L.)<\/a>
    \nChac\u00f3n B<\/strong>, Ballester R<\/strong>, Birlanga V<\/strong>, Rolland-Lagan AG, P\u00e9rez-P\u00e9rez JM<\/strong>
    \nPLoS One<\/em>\u00a08: e82165 (2013)<\/li>\n
  72. RETINOBLASTOMA-RELATED protein stimulates cell differentiation in the Arabidopsis root meristem by interacting with cytokinin signaling<\/a>
    \nPerilli S#<\/sup>,\u00a0P\u00e9rez-P\u00e9rez JM#<\/sup><\/strong>, Di Mambro R, Peris CL, D\u00edaz-Trivi\u00f1o S, Del Bianco M, Pierdonati E, Moubayidin L, Cruz-Ram\u00edrez A, Costantino P, Scheres B, Sabatini S
    \nPlant Cell<\/em>\u00a025: 4469 (2013)<\/li>\n
  73. Arabidopsis TRANSCURVATA1<\/em> encodes NUP58, a component of the nucleopore central channel<\/a>
    \nFerr\u00e1ndez-Ayela A<\/strong>, Alonso-Peral MM, S\u00e1nchez-Garc\u00eda AB, Micol-Ponce R, P\u00e9rez-P\u00e9rez JM<\/strong>, Micol JL, Ponce MR
    \nPLoS One<\/em> 8: e67661 (2013)<\/li>\n
  74. Functional redundancy and divergence within the Arabidopsis RETICULATA-RELATED<\/em> gene family<\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Esteve-Bruna D, Gonz\u00e1lez-Bay\u00f3n R, Kangasj\u00e4rvi S, Caldana C, Hannah MA, Willmitzer L, Ponce MR, Micol\u00a0JL
    \nPlant Physiol.<\/em> 175: 589 (2013)<\/li>\n
  75. Evaluation of ploidy level and endoreduplication in carnation (Dianthus<\/em> spp.)<\/a>
    \nAgull\u00f3-Ant\u00f3n MA<\/strong>, Olmos E, P\u00e9rez-P\u00e9rez JM<\/strong>, Acosta M
    \nPlant Science<\/em>\u00a0201: 1 (2013)\u00a0    [Open Access file]<\/a><\/li>\n
  76. incurvata13<\/em>, a novel allele of AUXIN RESISTANT6<\/em>, reveals a specific role for auxin and the SCF complex in Arabidopsis embryogenesis, vascular specification and leaf flatness<\/a>
    \nEsteve-Bruna D, P\u00e9rez-P\u00e9rez JM<\/strong>, Ponce MR, Micol JL
    \nPlant Physiol.<\/em>\u00a0175: 1303 (2013)<\/li>\n
  77. Cell expansion-mediated organ growth is affected by mutations in three EXIGUA<\/em> genes<\/a>
    \n<\/strong>Rubio-D\u00edaz S#<\/sup>, P\u00e9rez-P\u00e9rez JM<\/strong>#<\/sup>, Gonz\u00e1lez-Bay\u00f3n R, Mu\u00f1oz-Viana R, Borrega N, Mouille G, Hern\u00e1ndez-Romero D, Robles P, H\u00f6fte H, Ponce MR, Micol JL
    \nPLoS One<\/em> 7: e36500 (2012)<\/li>\n
  78. Whole organ, venation and epidermal cell morphological variations are correlated in the leaves of Arabidopsis mutants<\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Rubio-D\u00edaz S, Dhondt S, Hern\u00e1ndez-Romero D, S\u00e1nchez-Soriano J, Beemster GT, Ponce MR, Micol JL
    \nPlant Cell Environ.<\/em> 34: 2200 (2011)<\/li>\n
  79. Uncovering the post-embryonic functions of gametophytic- and embryonic-lethal genes<\/a>
    \nCandela H, P\u00e9rez-P\u00e9rez JM<\/strong>, Micol JL
    \nTrends Plant Sci.<\/em> 16: 336 (2011)<\/li>\n
  80. Analysis of ven3<\/em> and ven6<\/em> reticulate mutants reveals the importance of arginine biosynthesis in Arabidopsis leaf development<\/a>
    \n<\/strong>Moll\u00e1-Morales A, Sarmiento-Ma\u00f1\u00fas R, Robles P, Quesada V, P\u00e9rez-P\u00e9rez JM<\/strong>, Gonz\u00e1lez-Bay\u00f3n R, Hannah MA, Willmitzer L, Ponce MR, Micol JL
    \nPlant J.<\/em> 65: 335 (2011)<\/li>\n
  81. Differential contributions of ribosomal protein genes to Arabidopsis thaliana<\/em> leaf development<\/a>
    \n<\/strong>Horiguchi G, Moll\u00e1-Morales A, P\u00e9rez-P\u00e9rez JM<\/strong>, Kojima K, Robles P, Ponce MR, Micol JL, Tsukaya H
    \nPlant J.<\/em> 65: 724 (2011)<\/li>\n
  82. A role for AUXIN RESISTANT3<\/em> in the coordination of leaf growth<\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Candela H, Robles P, L\u00f3pez-Torrej\u00f3n G, del Pozo JC, Micol JL
    \nPlant Cell Physiol<\/em>. 51: 1661 (2010)<\/li>\n
  83. QTL analysis of leaf architecture<\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Esteve-Bruna D, Micol JL
    \nJ. Plant Res.<\/em> 123: 15 (2010)<\/li>\n
  84. Understanding synergy in genetic interactions<\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Candela H, Micol JL
    \nTrends Genet.<\/em> 2009 25: 368 (2009)<\/li>\n
  85. Lessons from a search for leaf mutants in Arabidopsis thaliana<\/em><\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Candela H, Robles P, Quesada V, Ponce MR, Micol JL
    \nInt. J. Dev. Biol.<\/em> 53: 1623 (2009)<\/li>\n
  86. Specialization of CDC27 function in the Arabidopsis thaliana<\/em> anaphase-promoting complex (APC\/C)<\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Serralbo O, Vanstraelen M, Gonz\u00e1lez C, Criqui MC, Genschik P, Kondorosi E, Scheres B
    \nPlant J.<\/em> 53: 78 (2008)<\/li>\n
  87. Hormone signalling and root development: an update on the latest Arabidopsis thaliana<\/em> research<\/a>
    \nP\u00e9rez-P\u00e9rez JM
    \n<\/strong>Funct. Plant Biol.<\/em> 34: 163 (2007)<\/li>\n
  88. Non-cell-autonomous rescue of anaphase-promoting complex function revealed by mosaic analysis of HOBBIT<\/em>, an Arabidopsis CDC27 homolog<\/a>
    \n<\/strong>Serralbo O#<\/sup>, P\u00e9rez-P\u00e9rez JM<\/strong>#<\/sup>, Heidstra R, Scheres B
    \nProc. Natl. Acad. Sci. USA<\/em> 103: 13250 (2006)<\/li>\n
  89. The RETINOBLASTOMA-RELATED<\/em> gene regulates stem cell maintenance in Arabidopsis roots<\/a>
    \n<\/strong>Wildwater M, Campilho A#<\/sup>,\u00a0Perez-Perez JM<\/strong>#<\/sup>, Heidstra R, Blilou I, Korthout H, Chatterjee J, Mariconti L, Gruissem W, Scheres B
    \nCell<\/em> 123: 1337 (2005)<\/li>\n
  90. Quantitative trait loci mapping of floral and leaf morphology traits in Arabidopsis thaliana<\/em>: evidence for modular genetic architecture<\/a>
    \n<\/strong>Juenger T, P\u00e9rez-P\u00e9rez JM<\/strong>, Bernal S, Micol JL
    \nEvol. Dev.<\/em> 7: 259 (2005)<\/li>\n
  91. The ULTRACURVATA2<\/em> gene of Arabidopsis encodes an FK506-binding protein involved in auxin and brassinosteroid signaling<\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Ponce MR, Micol JL
    \nPlant Physiol.<\/em> 134: 101 (2004)<\/li>\n
  92. Genetic analysis of natural variations in the architecture of Arabidopsis thaliana<\/em> vegetative leaves<\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Serrano-Cartagena J, Micol JL
    \nGenetics<\/em> 162: 893 (2002)<\/li>\n
  93. The UCU1<\/em> Arabidopsis gene encodes a SHAGGY\/GSK3-like kinase required for cell expansion along the proximodistal axis<\/a>
    \nP\u00e9rez-P\u00e9rez JM<\/strong>, Ponce MR, Micol JL
    \nDev. Biol.<\/em> 242: 161 (2002)<\/li>\n
  94. ULTRACURVATA1<\/em>, a SHAGGY<\/em>-like Arabidopsis gene required for cell elongation<\/a>
    \n<\/strong>P\u00e9rez-P\u00e9rez JM<\/strong>,\u00a0Ponce MR, Micol JL
    \nInt. J. Dev. Biol.<\/em>\u00a045:\u00a0S51 (2001)<\/li>\n
  95. Mutations in the ULTRACURVATA2<\/em> gene of Arabidopsis thaliana, which encodes a FKBP-like protein, cause dwarfism, leaf epinasty and helical rotation of several organs<\/a>
    \n<\/strong>P\u00e9rez-P\u00e9rez JM<\/strong>, Ponce MR, Micol JL
    \nInt. J. Dev. Biol.<\/em>\u00a045:\u00a0S49 (2001)<\/li>\n
  96. Genetic architecture of leaf morphogenesis in Arabidopsis thaliana<\/a>
    \n<\/strong>Robles P,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong>, Candela H, Quesada V, Barrero JM, Jover-Gil S, Ponce MR, Micol JL
    \nInt. J. Dev. Biol.<\/em>\u00a045:\u00a0S61 (2001)<\/li>\n
  97. Genetic and molecular analysis of INCURVATA2<\/em>, a negative regulator of floral homeotic genes in the leaves of Arabidopsis thaliana<\/em><\/a>
    \n<\/strong>Ponce MR, Barrero JM, Candela H, Robles P,\u00a0P\u00e9rez-P\u00e9rez JM<\/strong>, Piqueras P, Mart\u00ednez-Laborda A, Micol JL
    \nInt. J. Dev. Biol.<\/em>\u00a045:\u00a0S53 (2001)<\/li>\n
  98. Genetic analysis of incurvata<\/em> mutants reveals three independent genetic operations at work in Arabidopsis leaf morphogenesis<\/a>
    \n<\/strong>Serrano-Cartagena J, Candela H, Robles P, Ponce MR, P\u00e9rez-P\u00e9rez JM<\/strong>, Piqueras P, Micol JL
    \nGenetics<\/em> 156: 1363 (2000)<\/li>\n
  99. A multiplex reverse transcriptase-polymerase chain reaction method for fluorescence-based semiautomated detection of gene expression in Arabidopsis thaliana<\/em><\/a>
    \n<\/strong>Ponce MR, P\u00e9rez-P\u00e9rez JM<\/strong>, Piqueras P, Micol JL
    \nPlanta<\/em> 211: 606 (2000)<\/li>\n<\/ol>\n

    #<\/sup>Shared authorship<\/p>","protected":false},"excerpt":{"rendered":"

    Search for our publications on Pubmed or click on the titles below: Arabidopsis RETINOBLASTOMA-RELATED controls cell size during plant development in a dose-dependent manner Hamid RSB, Vadai-Nagy F, Gombos M, Domonkos I, P\u00e9rez-P\u00e9rez JM, Feh\u00e9r A, Magyar Z bioRxiv, doi.org\/10.64898\/2026.03.30.715244 (2026) Effects of novel biostimulants on the growth and transcriptomic\u2026<\/p>\n

    Continue reading<\/span><\/i><\/a><\/p>\n","protected":false},"author":1159,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"templates\/template-onecolumn.php","meta":{"_links_to":"","_links_to_target":""},"yoast_head":"\nPublications - Arolab<\/title>\n<meta name=\"description\" content=\"Research papers published by the group of Jos\u00e9 Manuel P\u00e9rez-P\u00e9rez.\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/arolab.umh.es\/publications\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"[:en]Publications[:es]Publicaciones[:] - Arolab\" \/>\n<meta property=\"og:description\" content=\"Research papers published by the group of Jos\u00e9 Manuel P\u00e9rez-P\u00e9rez.\" \/>\n<meta property=\"og:url\" content=\"https:\/\/arolab.umh.es\/publications\/\" \/>\n<meta property=\"og:site_name\" content=\"Arolab\" \/>\n<meta property=\"article:modified_time\" content=\"2026-04-13T20:10:24+00:00\" \/>\n<meta property=\"og:image\" content=\"http:\/\/arolab.umh.es\/files\/2016\/04\/portadas.jpg\" \/>\n<meta name=\"twitter:card\" content=\"summary\" \/>\n<meta name=\"twitter:site\" content=\"@arolabumh\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"15 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"Organization\",\"@id\":\"https:\/\/arolab.umh.es\/#organization\",\"name\":\"Instituto de Bioingenier\\u00eda. 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